alphagenome.visualization.plot_components.ContactMapsDiff

class alphagenome.visualization.plot_components.ContactMapsDiff(tdata, track_height=10.0, vmin=-1.0, vmax=1.0, ylabel_horizontal=True, ylabel_template='{name}', cmap='RdBu_r', max_num_tracks=10, **kwargs)

Component for visualizing contact map differences.

This component visualizes the difference between two contact maps. It uses a diverging red-blue color map with the center white color pinned to a value of zero, with negative values being blue and positive values being red.

The vmin and vmax parameters control the color scaling of the heatmap. Values outside this range will be clipped to vmin or vmax.

Attributes

Table

ContactMapsDiff.num_axes

Returns the number of matplotlib axes required by the component.

ContactMapsDiff.total_height

Returns the total figure height.

Methods

Table