score_interval

score_interval#

DnaClient.score_interval(interval, interval_scorers=(), *, organism=Organism.HOMO_SAPIENS, merge_stranded_gene_tracks=True)[source]#

Generate interval scores for a single given interval.

Parameters:
  • interval (Interval) – Interval to make prediction for.

  • interval_scorers (Sequence[GeneMaskScorer] (default: ())) – Sequence of interval scorers to use for scoring. If no interval scorers are provided, the recommended interval scorers for the organism will be used.

  • organism (Organism (default: <Organism.HOMO_SAPIENS: 9606>)) – Organism to use for the prediction.

  • merge_stranded_gene_tracks (bool (default: True)) – If True, merges gene-centric scores from stranded tracks into a single, unstranded track.

Return type:

list[AnnData]

Returns:

List of AnnData interval scores.