get_recommended_scorers

alphagenome.models.v2.variant_scorers.get_recommended_scorers(organism, cell_conditioning=False)

Returns the recommended variant scorers for a given organism.

Parameters:

• organism (EnumTypeWrapper) – Organism to return recommended scorers for.

• cell_conditioning (bool (default: False)) – Whether the scorers will be used with expression conditioning (cell_conditioning=). When True, includes 'SC_GENE_EXPRESSION_DENOISED' (denoised single-cell gene expression; one channel per strand, in CPM); when False, scorers in CELL_CONDITIONING_ONLY_OUTPUT_TYPES are excluded.

Return type:

list[CenterMaskScorer | ContactMapScorer | GeneMaskLFCScorer | GeneMaskActiveScorer | GeneMaskSplicingScorer | MethylationScorer | PolyadenylationScorer | SpliceJunctionScorer]

Returns:

List of recommended variant scorers.