GeneMaskScorer

class alphagenome.models.v1.interval_scorers.GeneMaskScorer(requested_output, width, aggregation_type)

Interval scorer for gene-mask scoring.

requested_output

The requested output type (e.g. ATAC, DNASE, etc.)

width

The width of the target interval to include in the aggregation.

aggregation_type

The type of aggregation to perform.

base_interval_scorer

The base interval scorer.

name

The name of the scorer (a composite of the above attributes that uniquely identifies a scorer combination).

to_proto()

Converts the scorer to its corresponding proto message.

Raises:

ValueError – If the requested output is not supported.